Hi!
I am trying to use the following commands in the notebook:
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but Jmol terminates and just returns a black picture. These commands work fine in the command line. I tried this both on my laptop and on the notebook server at sage.lacim.uqam.ca. Is there some configuration necessary to display jmol pictures in the notebook?
Thanks,
Jmol is a free, open source viewer of molecular structures useful for students, educators and researchers in chemistry, biochemistry and other fields dealing with molecular structure. It is cross-platform, running on Windows, Mac OS X, and Linux/Unix systems. The Jmol application is a standalone Java application that runs on the desktop. Download Jmol for Mac - Free and open source molecule viewer that helps users in biochemistry and chemistry research fields to study structures in a 3D environment.
Jmol returns a 3D representation of a molecule that may be used as a teaching tool, or for research e.g., in chemistry and biochemistry. It is written in the programming language Java, so it can run on the operating systems Windows, macOS, Linux, and Unix, if Java is installed. Jmol is a Java-based and open-source app that makes it possible for you to visualize, study and manage molecules in a 3D environment. Interesting utility that is exactly what you want from a.
Anne
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![Mac Mac](/uploads/1/1/9/3/119372340/882702140.jpg)
This is almost certainly to do with your specific configuration. We have had these kinds of issues on a recurring basis. I would suggest searching sage-support (though it's hard to do sometimes) for this. Sometimes it's a Linux thing, sometimes you need to update your Java, and sometimes it's a bug. What version do you have? We did fix some of these things in patches that should be in 4.7.
If you are using Mac OS X + Chrome there is a good thread on sage-support, although that problem was fixed (at least in 4.7.1). Aplikasi sistem informasi kepegawaian full. You may need to enable your browser to load java applets. Try going to http://jmol.sourceforge.net/demo/alphahelix/ and see if the jmol applet loads.
Thank you for your answers. I am running sage-4.7.1 under Mac OS. The jmol applet loads fine for me when I go to http://jmol.sourceforge.net/demo/alphahelix/ . I am not sure which operating system http://sage.lacim.uqam.ca uses, but the sage version there is sage-4.7. You can get a free account and see whether the problem also occurs for you there.
![Jmol Jmol](/uploads/1/1/9/3/119372340/658633570.jpg)
Thank you for your answers. I am running sage-4.7.1 under Mac OS. The jmol applet loads fine for me when I go to http://jmol.sourceforge.net/demo/alphahelix/ . I am not sure which operating system http://sage.lacim.uqam.ca uses, but the sage version there is sage-4.7. You can get a free account and see whether the problem also occurs for you there.
Jmol For Mac Font
PS: I am using Firefox.